Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 TSPY16P-201ENST00000449843 468 ntBASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 TERF1P3-201ENST00000505638 1227 ntBASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 RN7SL204P-201ENST00000582831 262 ntBASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ZNRF3Q9ULT6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 AL020996.1-203ENST00000536896 2307 ntBASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 GPS2P2-201ENST00000430745 888 ntBASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 KLF2P3-201ENST00000451977 1087 ntBASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ZNRF3Q9ULT6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 AC135776.1-201ENST00000319817 2481 ntBASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 MIR661-201ENST00000384842 89 ntBASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 AC012645.4-201ENST00000610691 1061 ntBASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.86■□□□□ 0.93
ZNRF3Q9ULT6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 AC046185.3-201ENST00000623228 1824 ntBASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 AKAP8P1-201ENST00000434743 1349 ntBASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 AL135744.1-201ENST00000565098 629 ntBASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ZNRF3Q9ULT6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms