Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.75■□□□□ 0.43
NCKIPSDQ9NZQ3 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCKIPSDQ9NZQ3 PP12613-201ENST00000424958 2230 ntBASIC17.75■□□□□ 0.43
NCKIPSDQ9NZQ3 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.75■□□□□ 0.43
NCKIPSDQ9NZQ3 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NCKIPSDQ9NZQ3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 DUTP2-201ENST00000519164 463 ntBASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 SLC25A6P4-201ENST00000586535 553 ntBASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 AC004263.2-201ENST00000617183 678 ntBASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.74■□□□□ 0.43
NCKIPSDQ9NZQ3 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 AC141586.5-201ENST00000624546 2050 ntBASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 AC132938.6-201ENST00000623828 1655 ntBASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
NCKIPSDQ9NZQ3 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.72■□□□□ 0.43
NCKIPSDQ9NZQ3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms