Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 RN7SL275P-201ENST00000582762 335 ntBASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PRDM9Q9NQV7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AKR1C7P-201ENST00000305623 895 ntBASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 RBM17P3-201ENST00000417687 1192 ntBASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 EMBP1-201ENST00000458200 901 ntBASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AD001527.2-201ENST00000622994 785 ntBASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PRDM9Q9NQV7 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 AC106795.1-205ENST00000512851 1056 ntBASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 AP001269.4-201ENST00000609611 512 ntBASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 SIRPAP1-201ENST00000448467 1770 ntBASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 AC020916.1-201ENST00000587762 1774 ntBASIC16.55■□□□□ 0.24
PRDM9Q9NQV7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms