Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NEUROD4Q9HD90 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 MYCLP1-201ENST00000372451 1075 ntBASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 PCED1CP-201ENST00000419887 785 ntBASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NEUROD4Q9HD90 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 IER3-202ENST00000376377 1350 ntBASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 TSPY22P-201ENST00000427496 604 ntBASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 AC090616.6-201ENST00000582640 721 ntBASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 AL592071.1-201ENST00000611956 408 ntBASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 AL139327.4-201ENST00000612362 153 ntBASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 AC093458.2-201ENST00000623150 629 ntBASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.56■□□□□ 0.24
NEUROD4Q9HD90 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 AL136038.3-201ENST00000561909 1096 ntBASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 AL353801.3-201ENST00000609898 542 ntBASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
NEUROD4Q9HD90 OR6D1P-203ENST00000641209 4860 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms