Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 AC096633.1-201ENST00000422446 749 ntBASIC18.1■□□□□ 0.49
PCDH9Q9HC56 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH9Q9HC56 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 AC116353.5-201ENST00000638148 1699 ntBASIC18.09■□□□□ 0.49
PCDH9Q9HC56 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 AL139327.4-201ENST00000612362 153 ntBASIC18.09■□□□□ 0.49
PCDH9Q9HC56 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH9Q9HC56 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
PCDH9Q9HC56 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
PCDH9Q9HC56 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 KRT18P1-202ENST00000452408 1331 ntBASIC18.07■□□□□ 0.48
PCDH9Q9HC56 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDH9Q9HC56 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms