Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
NR1H4Q96RI1 AC068587.6-202ENST00000641839 5619 ntBASIC16.51■□□□□ 0.23
NR1H4Q96RI1 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 AC144831.1-201ENST00000573312 2656 ntBASIC16.51■□□□□ 0.23
NR1H4Q96RI1 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 AC092118.2-201ENST00000613495 667 ntBASIC16.51■□□□□ 0.23
NR1H4Q96RI1 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 FAM45BP-202ENST00000592932 1624 ntBASIC16.51■□□□□ 0.23
NR1H4Q96RI1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.51■□□□□ 0.23
NR1H4Q96RI1 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 AC097658.1-201ENST00000475555 843 ntBASIC16.5■□□□□ 0.23
NR1H4Q96RI1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 MIR4758-201ENST00000577688 71 ntBASIC16.5■□□□□ 0.23
NR1H4Q96RI1 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 AC092368.3-202ENST00000574180 1591 ntBASIC16.5■□□□□ 0.23
NR1H4Q96RI1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
NR1H4Q96RI1 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.49■□□□□ 0.23
NR1H4Q96RI1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.49■□□□□ 0.23
NR1H4Q96RI1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms