Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.72■□□□□ 0.27
ITCHQ96J02 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
ITCHQ96J02 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.72■□□□□ 0.27
ITCHQ96J02 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ITCHQ96J02 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.71■□□□□ 0.27
ITCHQ96J02 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ITCHQ96J02 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.71■□□□□ 0.27
ITCHQ96J02 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.71■□□□□ 0.27
ITCHQ96J02 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 LIN28AP1-201ENST00000429574 405 ntBASIC16.71■□□□□ 0.27
ITCHQ96J02 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 AC145285.6-201ENST00000604632 637 ntBASIC16.71■□□□□ 0.27
ITCHQ96J02 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.71■□□□□ 0.27
ITCHQ96J02 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.71■□□□□ 0.27
ITCHQ96J02 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ITCHQ96J02 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ITCHQ96J02 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
ITCHQ96J02 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ITCHQ96J02 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.71■□□□□ 0.26
ITCHQ96J02 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ITCHQ96J02 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.7■□□□□ 0.26
ITCHQ96J02 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
ITCHQ96J02 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
ITCHQ96J02 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.7■□□□□ 0.26
ITCHQ96J02 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
ITCHQ96J02 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.7■□□□□ 0.26
ITCHQ96J02 COX11P1-201ENST00000489116 835 ntBASIC16.7■□□□□ 0.26
ITCHQ96J02 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.7■□□□□ 0.26
ITCHQ96J02 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.7■□□□□ 0.26
ITCHQ96J02 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
ITCHQ96J02 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.7■□□□□ 0.26
ITCHQ96J02 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ITCHQ96J02 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.7■□□□□ 0.26
ITCHQ96J02 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ITCHQ96J02 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.7■□□□□ 0.26
ITCHQ96J02 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.69■□□□□ 0.26
ITCHQ96J02 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
ITCHQ96J02 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 AC116353.5-201ENST00000638148 1699 ntBASIC16.69■□□□□ 0.26
ITCHQ96J02 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ITCHQ96J02 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ITCHQ96J02 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 AL139384.1-201ENST00000612143 3047 ntBASIC16.69■□□□□ 0.26
ITCHQ96J02 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ITCHQ96J02 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms