Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM43Q96BQ3 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 AL512638.1-201ENST00000457493 794 ntBASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 AC097493.3-201ENST00000509725 367 ntBASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM43Q96BQ3 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 AC116562.4-201ENST00000641316 2276 ntBASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 AL359881.2-201ENST00000602973 570 ntBASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 AL158211.3-201ENST00000607385 239 ntBASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 AC025048.6-201ENST00000634326 1161 ntBASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM43Q96BQ3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 NME2P1-201ENST00000426182 414 ntBASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 SERBP1P5-201ENST00000510079 1181 ntBASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 AL031598.1-201ENST00000561511 1773 ntBASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TRIM43Q96BQ3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.84■□□□□ 0.61
TRIM43Q96BQ3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 374.3 ms