Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC21.13■□□□□ 0.97
SNED1Q8TER0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SNED1Q8TER0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 AC236430.1-201ENST00000402231 743 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 CNN2P2-201ENST00000443536 909 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 CNN2P3-201ENST00000450201 906 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 AC190387.1-201ENST00000551683 408 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 AL136317.3-201ENST00000618497 906 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 AL035252.4-201ENST00000624174 288 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 AL135999.2-201ENST00000622438 1686 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 AC055876.3-201ENST00000431496 288 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 RN7SL204P-201ENST00000582831 262 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 AC012645.4-201ENST00000610691 1061 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 AC138649.4-201ENST00000612222 287 ntBASIC21.12■□□□□ 0.97
SNED1Q8TER0 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SNED1Q8TER0 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC21.12■□□□□ 0.97
SNED1Q8TER0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 AL135744.1-201ENST00000565098 629 ntBASIC21.11■□□□□ 0.97
SNED1Q8TER0 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SNED1Q8TER0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SNED1Q8TER0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 RN7SL589P-201ENST00000481268 310 ntBASIC21.1■□□□□ 0.97
SNED1Q8TER0 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 POLD4-211ENST00000539074 714 ntTSL 3 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.1■□□□□ 0.97
SNED1Q8TER0 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SNED1Q8TER0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 AC009113.1-201ENST00000570267 2443 ntBASIC21.09■□□□□ 0.97
SNED1Q8TER0 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SNED1Q8TER0 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.09■□□□□ 0.97
SNED1Q8TER0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms