Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
SIX5Q8N196 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SIX5Q8N196 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
SIX5Q8N196 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.9■□□□□ 0.46
SIX5Q8N196 AC003669.1-201ENST00000334569 611 ntBASIC17.9■□□□□ 0.46
SIX5Q8N196 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.9■□□□□ 0.46
SIX5Q8N196 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC17.9■□□□□ 0.46
SIX5Q8N196 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.9■□□□□ 0.46
SIX5Q8N196 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.9■□□□□ 0.46
SIX5Q8N196 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.9■□□□□ 0.46
SIX5Q8N196 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.9■□□□□ 0.46
SIX5Q8N196 OR7E47P-204ENST00000575924 449 ntBASIC17.9■□□□□ 0.46
SIX5Q8N196 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.9■□□□□ 0.46
SIX5Q8N196 AF228730.6-201ENST00000641497 218 ntBASIC17.9■□□□□ 0.46
SIX5Q8N196 AC084121.3-201ENST00000641716 218 ntBASIC17.9■□□□□ 0.46
SIX5Q8N196 AC105233.6-201ENST00000642093 218 ntBASIC17.9■□□□□ 0.46
SIX5Q8N196 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.9■□□□□ 0.46
SIX5Q8N196 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SIX5Q8N196 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SIX5Q8N196 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
SIX5Q8N196 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SIX5Q8N196 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
SIX5Q8N196 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX5Q8N196 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.89■□□□□ 0.45
SIX5Q8N196 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX5Q8N196 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SIX5Q8N196 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX5Q8N196 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.89■□□□□ 0.45
SIX5Q8N196 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SIX5Q8N196 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.89■□□□□ 0.45
SIX5Q8N196 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.89■□□□□ 0.45
SIX5Q8N196 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX5Q8N196 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC17.89■□□□□ 0.45
SIX5Q8N196 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.89■□□□□ 0.45
SIX5Q8N196 AC022145.2-201ENST00000598203 171 ntBASIC17.89■□□□□ 0.45
SIX5Q8N196 REXO1L3P-201ENST00000622202 1288 ntBASIC17.89■□□□□ 0.45
SIX5Q8N196 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.89■□□□□ 0.45
SIX5Q8N196 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.89■□□□□ 0.45
SIX5Q8N196 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
SIX5Q8N196 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.89■□□□□ 0.45
SIX5Q8N196 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX5Q8N196 AC005332.8-201ENST00000622750 2735 ntBASIC17.89■□□□□ 0.45
SIX5Q8N196 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
SIX5Q8N196 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
SIX5Q8N196 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX5Q8N196 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX5Q8N196 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 AP002414.1-201ENST00000391405 1147 ntBASIC17.88■□□□□ 0.45
SIX5Q8N196 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 HLA-J-202ENST00000469281 1241 ntBASIC17.88■□□□□ 0.45
SIX5Q8N196 RNA5SP421-201ENST00000516864 134 ntBASIC17.88■□□□□ 0.45
SIX5Q8N196 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.88■□□□□ 0.45
SIX5Q8N196 AC093520.2-201ENST00000561830 333 ntBASIC17.88■□□□□ 0.45
SIX5Q8N196 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.88■□□□□ 0.45
SIX5Q8N196 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.88■□□□□ 0.45
SIX5Q8N196 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SIX5Q8N196 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SIX5Q8N196 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.87■□□□□ 0.45
SIX5Q8N196 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.87■□□□□ 0.45
SIX5Q8N196 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX5Q8N196 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.87■□□□□ 0.45
SIX5Q8N196 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.87■□□□□ 0.45
SIX5Q8N196 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SIX5Q8N196 PMS2P4-201ENST00000412466 1052 ntBASIC17.87■□□□□ 0.45
SIX5Q8N196 AC015922.1-201ENST00000421102 1152 ntBASIC17.87■□□□□ 0.45
SIX5Q8N196 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms