Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 IGHV3-41-201ENST00000613121 348 ntBASIC16.22■□□□□ 0.19
VRK2Q86Y07 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VRK2Q86Y07 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VRK2Q86Y07 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
VRK2Q86Y07 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VRK2Q86Y07 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
VRK2Q86Y07 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
VRK2Q86Y07 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.22■□□□□ 0.19
VRK2Q86Y07 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 AC016396.2-201ENST00000562575 1417 ntBASIC16.21■□□□□ 0.19
VRK2Q86Y07 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 AL031133.1-201ENST00000406807 723 ntBASIC16.21■□□□□ 0.19
VRK2Q86Y07 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 AC002558.1-201ENST00000488906 803 ntBASIC16.21■□□□□ 0.19
VRK2Q86Y07 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 AC005336.2-201ENST00000593183 939 ntBASIC16.21■□□□□ 0.19
VRK2Q86Y07 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 AC099398.1-201ENST00000567919 2776 ntBASIC16.21■□□□□ 0.19
VRK2Q86Y07 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
VRK2Q86Y07 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.21■□□□□ 0.19
VRK2Q86Y07 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.21■□□□□ 0.18
VRK2Q86Y07 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
VRK2Q86Y07 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
VRK2Q86Y07 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.21■□□□□ 0.18
VRK2Q86Y07 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VRK2Q86Y07 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
VRK2Q86Y07 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.21■□□□□ 0.18
VRK2Q86Y07 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
VRK2Q86Y07 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
VRK2Q86Y07 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 AC125634.1-201ENST00000438758 1403 ntBASIC16.2■□□□□ 0.18
VRK2Q86Y07 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 KRT8P26-201ENST00000534154 1276 ntBASIC16.2■□□□□ 0.18
VRK2Q86Y07 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 AC090616.6-201ENST00000582640 721 ntBASIC16.2■□□□□ 0.18
VRK2Q86Y07 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
VRK2Q86Y07 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
VRK2Q86Y07 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
VRK2Q86Y07 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
VRK2Q86Y07 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms