Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RNF220Q5VTB9 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 EGLN1P1-201ENST00000531623 762 ntBASIC16.93■□□□□ 0.3
RNF220Q5VTB9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.93■□□□□ 0.3
RNF220Q5VTB9 SDHAP2-201ENST00000455183 2001 ntBASIC16.92■□□□□ 0.3
RNF220Q5VTB9 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 AC079328.2-201ENST00000561241 3354 ntBASIC16.92■□□□□ 0.3
RNF220Q5VTB9 DBET-201ENST00000630918 3363 ntBASIC16.92■□□□□ 0.3
RNF220Q5VTB9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 AC009065.1-201ENST00000564055 1225 ntBASIC16.92■□□□□ 0.3
RNF220Q5VTB9 MIR3180-4-201ENST00000582223 153 ntBASIC16.92■□□□□ 0.3
RNF220Q5VTB9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 BID-213ENST00000615414 2236 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RNF220Q5VTB9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.91■□□□□ 0.3
RNF220Q5VTB9 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms