Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 AC108860.2-201ENST00000562760 2183 ntBASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 AC004817.3-201ENST00000602957 2129 ntBASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CCSMST1Q4G0I0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 EMBP1-201ENST00000458200 901 ntBASIC17■□□□□ 0.31
CCSMST1Q4G0I0 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 AF238378.1-201ENST00000526806 358 ntBASIC17■□□□□ 0.31
CCSMST1Q4G0I0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 AC012313.1-201ENST00000593393 3059 ntBASIC17■□□□□ 0.31
CCSMST1Q4G0I0 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 REXO1L6P-202ENST00000619970 1078 ntBASIC17■□□□□ 0.31
CCSMST1Q4G0I0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CCSMST1Q4G0I0 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 AC046185.3-201ENST00000623228 1824 ntBASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 MYCLP1-201ENST00000372451 1075 ntBASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 KLF4P1-201ENST00000412782 1185 ntBASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 STK19B-204ENST00000512515 211 ntBASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 AC106795.1-205ENST00000512851 1056 ntBASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.99■□□□□ 0.31
CCSMST1Q4G0I0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CCSMST1Q4G0I0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms