Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 NOC2LP1-202ENST00000452600 2235 ntBASIC20.9■□□□□ 0.94
PDS5AQ29RF7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC20.9■□□□□ 0.94
PDS5AQ29RF7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PDS5AQ29RF7 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
PDS5AQ29RF7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
PDS5AQ29RF7 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 MTDHP5-201ENST00000598980 586 ntBASIC20.89■□□□□ 0.93
PDS5AQ29RF7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 AL355312.1-201ENST00000407115 2176 ntBASIC20.89■□□□□ 0.93
PDS5AQ29RF7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PDS5AQ29RF7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 PI4KAP1-204ENST00000612579 1703 ntBASIC20.88■□□□□ 0.93
PDS5AQ29RF7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PDS5AQ29RF7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 AC023274.1-201ENST00000418278 595 ntBASIC20.87■□□□□ 0.93
PDS5AQ29RF7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 AC010327.4-202ENST00000591484 748 ntBASIC20.87■□□□□ 0.93
PDS5AQ29RF7 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.87■□□□□ 0.93
PDS5AQ29RF7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDS5AQ29RF7 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
PDS5AQ29RF7 COA5-202ENST00000409997 557 ntTSL 4 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms