Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 Z83836.1-201ENST00000624605 1642 ntBASIC17.17■□□□□ 0.34
CDH13P55290 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDH13P55290 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDH13P55290 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH13P55290 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 LINC01311-201ENST00000565162 1445 ntBASIC17.16■□□□□ 0.34
CDH13P55290 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDH13P55290 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH13P55290 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDH13P55290 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDH13P55290 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.16■□□□□ 0.34
CDH13P55290 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH13P55290 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.16■□□□□ 0.34
CDH13P55290 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.16■□□□□ 0.34
CDH13P55290 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 AL121761.2-201ENST00000598007 1648 ntBASIC17.16■□□□□ 0.34
CDH13P55290 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDH13P55290 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.16■□□□□ 0.34
CDH13P55290 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDH13P55290 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
CDH13P55290 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
CDH13P55290 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH13P55290 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
CDH13P55290 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDH13P55290 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CDH13P55290 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH13P55290 AC104076.2-201ENST00000448912 469 ntBASIC17.15■□□□□ 0.34
CDH13P55290 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH13P55290 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH13P55290 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH13P55290 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.15■□□□□ 0.34
CDH13P55290 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH13P55290 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.15■□□□□ 0.34
CDH13P55290 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH13P55290 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH13P55290 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH13P55290 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.15■□□□□ 0.34
CDH13P55290 AC124067.4-201ENST00000519691 2379 ntBASIC17.15■□□□□ 0.34
CDH13P55290 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 AC010460.3-201ENST00000511359 1579 ntBASIC17.15■□□□□ 0.34
CDH13P55290 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDH13P55290 AC060834.1-201ENST00000443027 2032 ntBASIC17.14■□□□□ 0.34
CDH13P55290 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CDH13P55290 AC016396.2-201ENST00000562575 1417 ntBASIC17.14■□□□□ 0.33
CDH13P55290 AC106886.4-201ENST00000623557 2502 ntBASIC17.14■□□□□ 0.33
CDH13P55290 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.14■□□□□ 0.33
CDH13P55290 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.14■□□□□ 0.33
CDH13P55290 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CDH13P55290 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CDH13P55290 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms