Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.62■■□□□ 1.05
NUP98P52948 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
NUP98P52948 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NUP98P52948 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC21.62■■□□□ 1.05
NUP98P52948 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC21.62■■□□□ 1.05
NUP98P52948 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.62■■□□□ 1.05
NUP98P52948 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NUP98P52948 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC21.62■■□□□ 1.05
NUP98P52948 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
NUP98P52948 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
NUP98P52948 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.61■■□□□ 1.05
NUP98P52948 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
NUP98P52948 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC21.61■■□□□ 1.05
NUP98P52948 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC21.61■■□□□ 1.05
NUP98P52948 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.61■■□□□ 1.05
NUP98P52948 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
NUP98P52948 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP98P52948 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NUP98P52948 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP98P52948 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
NUP98P52948 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
NUP98P52948 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP98P52948 KRT8P48-201ENST00000515599 1220 ntBASIC21.61■■□□□ 1.05
NUP98P52948 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC21.61■■□□□ 1.05
NUP98P52948 REXO1L3P-201ENST00000622202 1288 ntBASIC21.61■■□□□ 1.05
NUP98P52948 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NUP98P52948 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
NUP98P52948 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC21.61■■□□□ 1.05
NUP98P52948 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.6■■□□□ 1.05
NUP98P52948 HLA-J-203ENST00000494367 1087 ntBASIC21.6■■□□□ 1.05
NUP98P52948 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
NUP98P52948 AC093520.2-201ENST00000561830 333 ntBASIC21.6■■□□□ 1.05
NUP98P52948 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.6■■□□□ 1.05
NUP98P52948 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.6■■□□□ 1.05
NUP98P52948 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC21.6■■□□□ 1.05
NUP98P52948 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC21.6■■□□□ 1.05
NUP98P52948 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NUP98P52948 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 SLBP-205ENST00000488267 987 ntTSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 AC005498.2-205ENST00000593218 784 ntBASIC21.59■■□□□ 1.05
NUP98P52948 LINC02084-201ENST00000606069 1096 ntBASIC21.59■■□□□ 1.05
NUP98P52948 AC106028.4-201ENST00000614509 607 ntBASIC21.59■■□□□ 1.05
NUP98P52948 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC21.59■■□□□ 1.05
NUP98P52948 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
NUP98P52948 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
NUP98P52948 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.59■■□□□ 1.05
NUP98P52948 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.59■■□□□ 1.05
NUP98P52948 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC21.59■■□□□ 1.05
NUP98P52948 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NUP98P52948 AC011467.4-201ENST00000594891 528 ntBASIC21.59■■□□□ 1.05
NUP98P52948 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC21.59■■□□□ 1.05
NUP98P52948 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NUP98P52948 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NUP98P52948 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NUP98P52948 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC21.58■■□□□ 1.05
NUP98P52948 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NUP98P52948 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NUP98P52948 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
NUP98P52948 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC21.58■■□□□ 1.05
NUP98P52948 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
NUP98P52948 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.58■■□□□ 1.05
NUP98P52948 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC21.58■■□□□ 1.05
NUP98P52948 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.58■■□□□ 1.04
NUP98P52948 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUP98P52948 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC21.58■■□□□ 1.04
NUP98P52948 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NUP98P52948 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NUP98P52948 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NUP98P52948 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NUP98P52948 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC21.57■■□□□ 1.04
NUP98P52948 AL355312.1-201ENST00000407115 2176 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms