Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP13P45452 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
MMP13P45452 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
MMP13P45452 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.25■□□□□ 0.51
MMP13P45452 CHCHD2P8-201ENST00000429873 447 ntBASIC18.25■□□□□ 0.51
MMP13P45452 RN7SL606P-201ENST00000472779 293 ntBASIC18.25■□□□□ 0.51
MMP13P45452 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 AC124864.1-201ENST00000623408 392 ntBASIC18.25■□□□□ 0.51
MMP13P45452 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.25■□□□□ 0.51
MMP13P45452 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 PCDHB19P-201ENST00000570871 2371 ntBASIC18.25■□□□□ 0.51
MMP13P45452 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.25■□□□□ 0.51
MMP13P45452 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
MMP13P45452 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.25■□□□□ 0.51
MMP13P45452 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 TSSC2-201ENST00000450217 709 ntBASIC18.24■□□□□ 0.51
MMP13P45452 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC18.24■□□□□ 0.51
MMP13P45452 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.24■□□□□ 0.51
MMP13P45452 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP13P45452 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MMP13P45452 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.23■□□□□ 0.51
MMP13P45452 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
MMP13P45452 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP13P45452 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
MMP13P45452 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MMP13P45452 AC069148.1-201ENST00000608741 768 ntBASIC18.23■□□□□ 0.51
MMP13P45452 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP13P45452 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.23■□□□□ 0.51
MMP13P45452 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC18.23■□□□□ 0.51
MMP13P45452 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP13P45452 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
MMP13P45452 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP13P45452 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP13P45452 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP13P45452 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP13P45452 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.22■□□□□ 0.51
MMP13P45452 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 AGGF1P2-201ENST00000426656 2106 ntBASIC18.22■□□□□ 0.51
MMP13P45452 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
MMP13P45452 KRT8P47-201ENST00000604727 1398 ntBASIC18.22■□□□□ 0.51
MMP13P45452 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
MMP13P45452 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP13P45452 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP13P45452 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC18.22■□□□□ 0.51
MMP13P45452 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.22■□□□□ 0.51
MMP13P45452 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.22■□□□□ 0.51
MMP13P45452 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MMP13P45452 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.22■□□□□ 0.51
MMP13P45452 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP13P45452 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP13P45452 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MMP13P45452 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
MMP13P45452 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP13P45452 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms