Protein–RNA interactions for Protein: P35558

PCK1, Phosphoenolpyruvate carboxykinase, cytosolic [GTP], humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCK1P35558 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.47■□□□□ 0.55
PCK1P35558 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.47■□□□□ 0.55
PCK1P35558 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.47■□□□□ 0.55
PCK1P35558 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
PCK1P35558 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PCK1P35558 COX5BP2-201ENST00000392354 334 ntBASIC18.47■□□□□ 0.55
PCK1P35558 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.47■□□□□ 0.55
PCK1P35558 AL845331.1-201ENST00000424978 1190 ntBASIC18.47■□□□□ 0.55
PCK1P35558 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.47■□□□□ 0.55
PCK1P35558 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.47■□□□□ 0.55
PCK1P35558 IGHV3-41-201ENST00000613121 348 ntBASIC18.47■□□□□ 0.55
PCK1P35558 AC116407.4-201ENST00000623319 1061 ntBASIC18.47■□□□□ 0.55
PCK1P35558 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.47■□□□□ 0.55
PCK1P35558 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.47■□□□□ 0.55
PCK1P35558 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
PCK1P35558 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.47■□□□□ 0.55
PCK1P35558 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.47■□□□□ 0.55
PCK1P35558 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PCK1P35558 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.46■□□□□ 0.55
PCK1P35558 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PCK1P35558 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PCK1P35558 SIRPAP1-201ENST00000448467 1770 ntBASIC18.46■□□□□ 0.55
PCK1P35558 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.46■□□□□ 0.55
PCK1P35558 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.46■□□□□ 0.55
PCK1P35558 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.46■□□□□ 0.55
PCK1P35558 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.46■□□□□ 0.55
PCK1P35558 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.46■□□□□ 0.55
PCK1P35558 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PCK1P35558 AL121672.3-201ENST00000608644 468 ntBASIC18.46■□□□□ 0.55
PCK1P35558 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.46■□□□□ 0.55
PCK1P35558 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
PCK1P35558 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
PCK1P35558 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PCK1P35558 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.46■□□□□ 0.55
PCK1P35558 AC010460.3-201ENST00000511359 1579 ntBASIC18.46■□□□□ 0.55
PCK1P35558 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.46■□□□□ 0.54
PCK1P35558 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
PCK1P35558 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.45■□□□□ 0.54
PCK1P35558 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.45■□□□□ 0.54
PCK1P35558 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.45■□□□□ 0.54
PCK1P35558 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.45■□□□□ 0.54
PCK1P35558 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 AL645608.8-201ENST00000606034 2086 ntBASIC18.45■□□□□ 0.54
PCK1P35558 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.45■□□□□ 0.54
PCK1P35558 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
PCK1P35558 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.45■□□□□ 0.54
PCK1P35558 AC246785.2-201ENST00000432512 513 ntBASIC18.45■□□□□ 0.54
PCK1P35558 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.45■□□□□ 0.54
PCK1P35558 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 AC008894.3-201ENST00000624324 3103 ntBASIC18.45■□□□□ 0.54
PCK1P35558 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 AC125634.1-201ENST00000438758 1403 ntBASIC18.45■□□□□ 0.54
PCK1P35558 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.45■□□□□ 0.54
PCK1P35558 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PCK1P35558 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms