Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.7■□□□□ 0.42
CCND1P24385 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCND1P24385 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCND1P24385 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CCND1P24385 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCND1P24385 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.7■□□□□ 0.42
CCND1P24385 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCND1P24385 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCND1P24385 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.69■□□□□ 0.42
CCND1P24385 AC106886.4-201ENST00000623557 2502 ntBASIC17.69■□□□□ 0.42
CCND1P24385 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCND1P24385 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CCND1P24385 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 RCN1P1-201ENST00000400413 996 ntBASIC17.69■□□□□ 0.42
CCND1P24385 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.69■□□□□ 0.42
CCND1P24385 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.69■□□□□ 0.42
CCND1P24385 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.69■□□□□ 0.42
CCND1P24385 AC006011.2-201ENST00000621313 1158 ntBASIC17.69■□□□□ 0.42
CCND1P24385 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCND1P24385 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCND1P24385 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CCND1P24385 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.68■□□□□ 0.42
CCND1P24385 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.68■□□□□ 0.42
CCND1P24385 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.68■□□□□ 0.42
CCND1P24385 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCND1P24385 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.68■□□□□ 0.42
CCND1P24385 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCND1P24385 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCND1P24385 FAM8A6P-201ENST00000407496 1135 ntBASIC17.68■□□□□ 0.42
CCND1P24385 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 AC092647.4-201ENST00000457211 535 ntBASIC17.68■□□□□ 0.42
CCND1P24385 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.68■□□□□ 0.42
CCND1P24385 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
CCND1P24385 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.68■□□□□ 0.42
CCND1P24385 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCND1P24385 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.68■□□□□ 0.42
CCND1P24385 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CCND1P24385 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 LINC02199-201ENST00000506655 2702 ntBASIC17.68■□□□□ 0.42
CCND1P24385 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CCND1P24385 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.68■□□□□ 0.42
CCND1P24385 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCND1P24385 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.67■□□□□ 0.42
CCND1P24385 AC008741.2-201ENST00000612792 3115 ntBASIC17.67■□□□□ 0.42
CCND1P24385 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.67■□□□□ 0.42
CCND1P24385 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 AL024508.2-201ENST00000607749 1894 ntBASIC17.67■□□□□ 0.42
CCND1P24385 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CCND1P24385 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.67■□□□□ 0.42
CCND1P24385 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCND1P24385 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms