Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.92■□□□□ 0.14
FREM3P0C091 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.92■□□□□ 0.14
FREM3P0C091 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
FREM3P0C091 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.92■□□□□ 0.14
FREM3P0C091 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC15.91■□□□□ 0.14
FREM3P0C091 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
FREM3P0C091 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FREM3P0C091 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.91■□□□□ 0.14
FREM3P0C091 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 AP000347.1-202ENST00000435868 847 ntBASIC15.91■□□□□ 0.14
FREM3P0C091 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 AC073648.2-201ENST00000510116 352 ntBASIC15.91■□□□□ 0.14
FREM3P0C091 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
FREM3P0C091 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC15.91■□□□□ 0.14
FREM3P0C091 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 ACTG1P4-201ENST00000425123 1122 ntBASIC15.91■□□□□ 0.14
FREM3P0C091 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.91■□□□□ 0.14
FREM3P0C091 RNA5SP415-201ENST00000517246 115 ntBASIC15.91■□□□□ 0.14
FREM3P0C091 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.91■□□□□ 0.14
FREM3P0C091 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.91■□□□□ 0.14
FREM3P0C091 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.91■□□□□ 0.14
FREM3P0C091 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.91■□□□□ 0.14
FREM3P0C091 AD001527.2-201ENST00000622994 785 ntBASIC15.91■□□□□ 0.14
FREM3P0C091 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
FREM3P0C091 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FREM3P0C091 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.9■□□□□ 0.14
FREM3P0C091 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
FREM3P0C091 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 AL353593.2-201ENST00000602529 1483 ntBASIC15.9■□□□□ 0.14
FREM3P0C091 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
FREM3P0C091 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
FREM3P0C091 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.9■□□□□ 0.14
FREM3P0C091 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.9■□□□□ 0.14
FREM3P0C091 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC15.9■□□□□ 0.14
FREM3P0C091 RPL13AP23-201ENST00000480739 586 ntBASIC15.9■□□□□ 0.14
FREM3P0C091 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.9■□□□□ 0.14
FREM3P0C091 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FREM3P0C091 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
FREM3P0C091 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FREM3P0C091 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
FREM3P0C091 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.9■□□□□ 0.14
FREM3P0C091 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
FREM3P0C091 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
FREM3P0C091 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.14
FREM3P0C091 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.89■□□□□ 0.14
FREM3P0C091 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC15.89■□□□□ 0.13
FREM3P0C091 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.89■□□□□ 0.13
FREM3P0C091 PON3-205ENST00000451904 1053 ntTSL 3 BASIC15.89■□□□□ 0.13
FREM3P0C091 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.89■□□□□ 0.13
FREM3P0C091 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 AC064862.7-201ENST00000604520 867 ntBASIC15.89■□□□□ 0.13
FREM3P0C091 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
FREM3P0C091 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.89■□□□□ 0.13
FREM3P0C091 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
FREM3P0C091 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms