Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
MT-ND3P03897 VENTXP5-201ENST00000523979 775 ntBASIC17.89■□□□□ 0.45
MT-ND3P03897 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.89■□□□□ 0.45
MT-ND3P03897 GCSHP2-201ENST00000560971 527 ntBASIC17.89■□□□□ 0.45
MT-ND3P03897 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.89■□□□□ 0.45
MT-ND3P03897 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-ND3P03897 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-ND3P03897 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.89■□□□□ 0.45
MT-ND3P03897 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
MT-ND3P03897 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
MT-ND3P03897 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.89■□□□□ 0.45
MT-ND3P03897 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
MT-ND3P03897 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.89■□□□□ 0.45
MT-ND3P03897 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
MT-ND3P03897 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
MT-ND3P03897 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC17.88■□□□□ 0.45
MT-ND3P03897 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.88■□□□□ 0.45
MT-ND3P03897 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC17.88■□□□□ 0.45
MT-ND3P03897 ZNF444P1-201ENST00000559497 298 ntBASIC17.88■□□□□ 0.45
MT-ND3P03897 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.88■□□□□ 0.45
MT-ND3P03897 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.88■□□□□ 0.45
MT-ND3P03897 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 AC005332.1-201ENST00000577698 1310 ntBASIC17.88■□□□□ 0.45
MT-ND3P03897 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.88■□□□□ 0.45
MT-ND3P03897 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
MT-ND3P03897 LINC00167-201ENST00000530583 1419 ntBASIC17.88■□□□□ 0.45
MT-ND3P03897 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
MT-ND3P03897 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.88■□□□□ 0.45
MT-ND3P03897 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.88■□□□□ 0.45
MT-ND3P03897 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.88■□□□□ 0.45
MT-ND3P03897 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 AL118508.1-201ENST00000613502 2345 ntBASIC17.87■□□□□ 0.45
MT-ND3P03897 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 AC009949.1-201ENST00000623048 1830 ntBASIC17.87■□□□□ 0.45
MT-ND3P03897 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
MT-ND3P03897 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.87■□□□□ 0.45
MT-ND3P03897 KRT18P38-201ENST00000449496 1282 ntBASIC17.87■□□□□ 0.45
MT-ND3P03897 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.87■□□□□ 0.45
MT-ND3P03897 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC17.87■□□□□ 0.45
MT-ND3P03897 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 AC116407.4-201ENST00000623319 1061 ntBASIC17.87■□□□□ 0.45
MT-ND3P03897 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.87■□□□□ 0.45
MT-ND3P03897 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.87■□□□□ 0.45
MT-ND3P03897 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.87■□□□□ 0.45
MT-ND3P03897 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
MT-ND3P03897 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
MT-ND3P03897 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
MT-ND3P03897 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms