Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.71□□□□□ -0.21
ZNF253O75346 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF253O75346 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.71□□□□□ -0.21
ZNF253O75346 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 PCDHA1-201ENST00000378133 2726 ntBASIC13.71□□□□□ -0.21
ZNF253O75346 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 AC133963.1-201ENST00000504166 1679 ntBASIC13.71□□□□□ -0.21
ZNF253O75346 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ZNF253O75346 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
ZNF253O75346 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF253O75346 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF253O75346 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF253O75346 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC13.71□□□□□ -0.22
ZNF253O75346 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
ZNF253O75346 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
ZNF253O75346 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
ZNF253O75346 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
ZNF253O75346 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF253O75346 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF253O75346 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF253O75346 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF253O75346 HYMAI-201ENST00000635591 3347 ntBASIC13.7□□□□□ -0.22
ZNF253O75346 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF253O75346 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.7□□□□□ -0.22
ZNF253O75346 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
ZNF253O75346 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF253O75346 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.7□□□□□ -0.22
ZNF253O75346 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF253O75346 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF253O75346 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF253O75346 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF253O75346 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.7□□□□□ -0.22
ZNF253O75346 AC010240.3-201ENST00000607688 395 ntBASIC13.7□□□□□ -0.22
ZNF253O75346 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF253O75346 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.7□□□□□ -0.22
ZNF253O75346 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
ZNF253O75346 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF253O75346 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
ZNF253O75346 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ZNF253O75346 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ZNF253O75346 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ZNF253O75346 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
ZNF253O75346 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF253O75346 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF253O75346 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF253O75346 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.69□□□□□ -0.22
ZNF253O75346 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ZNF253O75346 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF253O75346 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC13.69□□□□□ -0.22
ZNF253O75346 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.69□□□□□ -0.22
ZNF253O75346 AC116407.2-201ENST00000613639 860 ntBASIC13.69□□□□□ -0.22
ZNF253O75346 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ZNF253O75346 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms