Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.42■□□□□ 0.22
HCN1O60741 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.42■□□□□ 0.22
HCN1O60741 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.42■□□□□ 0.22
HCN1O60741 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.42■□□□□ 0.22
HCN1O60741 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HCN1O60741 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HCN1O60741 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.42■□□□□ 0.22
HCN1O60741 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HCN1O60741 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HCN1O60741 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
HCN1O60741 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HCN1O60741 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 AC004870.1-201ENST00000315132 882 ntBASIC16.41■□□□□ 0.22
HCN1O60741 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.41■□□□□ 0.22
HCN1O60741 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.41■□□□□ 0.22
HCN1O60741 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HCN1O60741 FAAHP1-202ENST00000446499 1238 ntBASIC16.41■□□□□ 0.22
HCN1O60741 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
HCN1O60741 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 AC091304.2-201ENST00000564639 760 ntBASIC16.41■□□□□ 0.22
HCN1O60741 AC074051.2-201ENST00000565115 352 ntBASIC16.41■□□□□ 0.22
HCN1O60741 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.41■□□□□ 0.22
HCN1O60741 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.41■□□□□ 0.22
HCN1O60741 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.41■□□□□ 0.22
HCN1O60741 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
HCN1O60741 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HCN1O60741 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.4■□□□□ 0.22
HCN1O60741 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HCN1O60741 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.4■□□□□ 0.22
HCN1O60741 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.4■□□□□ 0.22
HCN1O60741 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.4■□□□□ 0.22
HCN1O60741 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.4■□□□□ 0.22
HCN1O60741 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 RN7SL510P-201ENST00000581311 263 ntBASIC16.4■□□□□ 0.22
HCN1O60741 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.4■□□□□ 0.22
HCN1O60741 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
HCN1O60741 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.4■□□□□ 0.22
HCN1O60741 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
HCN1O60741 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HCN1O60741 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HCN1O60741 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms