Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
NDUFA1O15239 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.02□□□□□ -0.49
NDUFA1O15239 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NDUFA1O15239 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 MDFI-202ENST00000373050 809 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12.02□□□□□ -0.49
NDUFA1O15239 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.02□□□□□ -0.49
NDUFA1O15239 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.02□□□□□ -0.49
NDUFA1O15239 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC12.02□□□□□ -0.49
NDUFA1O15239 AL353719.1-201ENST00000566847 864 ntBASIC12.02□□□□□ -0.49
NDUFA1O15239 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.02□□□□□ -0.49
NDUFA1O15239 MIR3180-4-201ENST00000582223 153 ntBASIC12.02□□□□□ -0.49
NDUFA1O15239 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 AC116407.2-201ENST00000613639 860 ntBASIC12.02□□□□□ -0.49
NDUFA1O15239 AC112497.1-201ENST00000624824 639 ntBASIC12.02□□□□□ -0.49
NDUFA1O15239 AC060834.1-201ENST00000443027 2032 ntBASIC12.02□□□□□ -0.49
NDUFA1O15239 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
NDUFA1O15239 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
NDUFA1O15239 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
NDUFA1O15239 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.02□□□□□ -0.49
NDUFA1O15239 AC016396.2-201ENST00000562575 1417 ntBASIC12.02□□□□□ -0.49
NDUFA1O15239 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC12.02□□□□□ -0.49
NDUFA1O15239 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
NDUFA1O15239 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.02□□□□□ -0.49
NDUFA1O15239 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
NDUFA1O15239 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.02□□□□□ -0.49
NDUFA1O15239 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFA1O15239 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NDUFA1O15239 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
NDUFA1O15239 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.01□□□□□ -0.49
NDUFA1O15239 AC098590.1-201ENST00000468126 897 ntBASIC12.01□□□□□ -0.49
NDUFA1O15239 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC12.01□□□□□ -0.49
NDUFA1O15239 DHDH-203ENST00000522614 776 ntTSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 REXO2-216ENST00000544196 452 ntTSL 3 BASIC12.01□□□□□ -0.49
NDUFA1O15239 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.01□□□□□ -0.49
NDUFA1O15239 AC008687.5-201ENST00000593746 558 ntBASIC12.01□□□□□ -0.49
NDUFA1O15239 CR769767.2-201ENST00000622735 460 ntBASIC12.01□□□□□ -0.49
NDUFA1O15239 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFA1O15239 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFA1O15239 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
NDUFA1O15239 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFA1O15239 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC12.01□□□□□ -0.49
NDUFA1O15239 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.01□□□□□ -0.49
NDUFA1O15239 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
NDUFA1O15239 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
NDUFA1O15239 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC12□□□□□ -0.49
NDUFA1O15239 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
NDUFA1O15239 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms