Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 AP001269.4-201ENST00000609611 512 ntBASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMX2-CTNND1H3BSU7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC108860.2-201ENST00000562760 2183 ntBASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC092865.5-201ENST00000545435 363 ntBASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMX2-CTNND1H3BSU7 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC022211.2-201ENST00000585075 2527 ntBASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 HLA-J-201ENST00000462773 1622 ntBASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 AL356309.3-201ENST00000624132 1934 ntBASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TMX2-CTNND1H3BSU7 AL139288.1-201ENST00000623748 933 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms