Protein–RNA interactions for Protein: A6NEE1

PLEKHD1, Pleckstrin homology domain-containing family D member 1, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHD1A6NEE1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PLEKHD1A6NEE1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
PLEKHD1A6NEE1 KRT18P55-202ENST00000578578 1546 ntBASIC26.74■■□□□ 1.87
PLEKHD1A6NEE1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PLEKHD1A6NEE1 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
PLEKHD1A6NEE1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 INO80E-210ENST00000567705 880 ntTSL 3 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
PLEKHD1A6NEE1 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 AKAP8P1-201ENST00000434743 1349 ntBASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 WIZP1-201ENST00000531444 2299 ntBASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 AL135744.1-201ENST00000565098 629 ntBASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
PLEKHD1A6NEE1 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 MIR943-201ENST00000401286 94 ntBASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 AC236430.1-201ENST00000402231 743 ntBASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 AC002472.2-201ENST00000442739 958 ntBASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 RBM7-207ENST00000544582 692 ntTSL 3 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 RARRES2P8-201ENST00000566335 367 ntBASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 NAA60-208ENST00000570819 833 ntTSL 2 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 RN7SL204P-201ENST00000582831 262 ntBASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 AL035252.4-201ENST00000624174 288 ntBASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
PLEKHD1A6NEE1 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PLEKHD1A6NEE1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC26.7■■□□□ 1.87
PLEKHD1A6NEE1 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
PLEKHD1A6NEE1 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC26.7■■□□□ 1.87
PLEKHD1A6NEE1 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
PLEKHD1A6NEE1 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC26.7■■□□□ 1.87
PLEKHD1A6NEE1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 MIR661-201ENST00000384842 89 ntBASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 KLF2P3-201ENST00000451977 1087 ntBASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 OARD1-208ENST00000469104 704 ntTSL 2 BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 MIR4515-201ENST00000584082 81 ntBASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC26.7■■□□□ 1.86
PLEKHD1A6NEE1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 AC063926.2-201ENST00000623766 1308 ntBASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 AC005034.1-201ENST00000426657 489 ntBASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 TSPY16P-201ENST00000449843 468 ntBASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 DUX4L17-201ENST00000557360 1267 ntBASIC26.69■■□□□ 1.86
PLEKHD1A6NEE1 AC087641.1-201ENST00000557561 1021 ntBASIC26.69■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 253.5 ms