Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF6Q9Y252 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 AC093010.1-201ENST00000473625 1624 ntBASIC16.57■□□□□ 0.24
RNF6Q9Y252 AL121761.2-201ENST00000598007 1648 ntBASIC16.57■□□□□ 0.24
RNF6Q9Y252 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 AC111152.3-201ENST00000569699 673 ntBASIC16.57■□□□□ 0.24
RNF6Q9Y252 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 AP002414.4-201ENST00000589764 1148 ntBASIC16.57■□□□□ 0.24
RNF6Q9Y252 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF6Q9Y252 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 AL391807.1-203ENST00000604392 2365 ntBASIC16.57■□□□□ 0.24
RNF6Q9Y252 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RNF6Q9Y252 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 WDR6-223ENST00000627177 207 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF6Q9Y252 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.56■□□□□ 0.24
RNF6Q9Y252 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.55■□□□□ 0.24
RNF6Q9Y252 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF6Q9Y252 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
RNF6Q9Y252 SDHAP2-201ENST00000455183 2001 ntBASIC16.55■□□□□ 0.24
RNF6Q9Y252 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
RNF6Q9Y252 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RNF6Q9Y252 AC004870.1-201ENST00000315132 882 ntBASIC16.55■□□□□ 0.24
RNF6Q9Y252 AL845331.1-201ENST00000424978 1190 ntBASIC16.55■□□□□ 0.24
RNF6Q9Y252 CHCHD2P8-201ENST00000429873 447 ntBASIC16.55■□□□□ 0.24
RNF6Q9Y252 AC246785.2-201ENST00000432512 513 ntBASIC16.55■□□□□ 0.24
RNF6Q9Y252 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF6Q9Y252 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
RNF6Q9Y252 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.55■□□□□ 0.24
RNF6Q9Y252 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms