Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
CHMP2BQ9UQN3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 AC092597.1-201ENST00000487352 616 ntBASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 AC060834.1-201ENST00000443027 2032 ntBASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CHMP2BQ9UQN3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 AC005104.2-201ENST00000427818 678 ntBASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 AC106886.4-201ENST00000623557 2502 ntBASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
CHMP2BQ9UQN3 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 IGHGP-201ENST00000390555 1178 ntBASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 AC011558.1-201ENST00000623459 338 ntBASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 AL031432.5-201ENST00000641059 760 ntBASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CHMP2BQ9UQN3 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CHMP2BQ9UQN3 STARP1-201ENST00000397973 869 ntBASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms