Protein–RNA interactions for Protein: Q9NRL3

STRN4, Striatin-4, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4Q9NRL3 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 BSG-214ENST00000614867 960 ntTSL 3 BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 FO538757.1-201ENST00000623083 1397 ntBASIC23.08■■□□□ 1.29
STRN4Q9NRL3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
STRN4Q9NRL3 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
STRN4Q9NRL3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
STRN4Q9NRL3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.28
STRN4Q9NRL3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
STRN4Q9NRL3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.08■■□□□ 1.28
STRN4Q9NRL3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 RAC2-204ENST00000406508 893 ntTSL 5 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 AC107890.1-201ENST00000422478 521 ntBASIC23.07■■□□□ 1.28
STRN4Q9NRL3 ACTG1P4-201ENST00000425123 1122 ntBASIC23.07■■□□□ 1.28
STRN4Q9NRL3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 AC007274.1-201ENST00000439805 662 ntBASIC23.07■■□□□ 1.28
STRN4Q9NRL3 GAPDHP21-201ENST00000450301 1010 ntBASIC23.07■■□□□ 1.28
STRN4Q9NRL3 AC125807.1-201ENST00000483097 614 ntBASIC23.07■■□□□ 1.28
STRN4Q9NRL3 SLC25A6P2-201ENST00000497974 877 ntBASIC23.07■■□□□ 1.28
STRN4Q9NRL3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 LINC02560-201ENST00000596379 459 ntBASIC23.07■■□□□ 1.28
STRN4Q9NRL3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 AL390754.1-201ENST00000619088 582 ntBASIC23.07■■□□□ 1.28
STRN4Q9NRL3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC23.07■■□□□ 1.28
STRN4Q9NRL3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 TREML5P-201ENST00000421694 576 ntBASIC23.06■■□□□ 1.28
STRN4Q9NRL3 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 SLC25A39P2-201ENST00000537614 270 ntBASIC23.06■■□□□ 1.28
STRN4Q9NRL3 AC243562.1-201ENST00000560672 389 ntBASIC23.06■■□□□ 1.28
STRN4Q9NRL3 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
STRN4Q9NRL3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 AL031598.1-201ENST00000561511 1773 ntBASIC23.05■■□□□ 1.28
STRN4Q9NRL3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 GPS2P2-201ENST00000430745 888 ntBASIC23.05■■□□□ 1.28
STRN4Q9NRL3 RBPMS2P1-201ENST00000437762 623 ntBASIC23.05■■□□□ 1.28
STRN4Q9NRL3 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 IGHV3-42-201ENST00000520410 361 ntBASIC23.05■■□□□ 1.28
STRN4Q9NRL3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 AP001059.3-201ENST00000619053 235 ntBASIC23.05■■□□□ 1.28
STRN4Q9NRL3 AC008761.3-201ENST00000624803 892 ntBASIC23.05■■□□□ 1.28
STRN4Q9NRL3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC23.05■■□□□ 1.28
STRN4Q9NRL3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.04■■□□□ 1.28
STRN4Q9NRL3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
STRN4Q9NRL3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
STRN4Q9NRL3 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
STRN4Q9NRL3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC23.04■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms