Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 AC145285.6-201ENST00000604632 637 ntBASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SLC52A3Q9NQ40 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AP003733.1-201ENST00000491725 852 ntBASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AC010203.1-204ENST00000548782 407 ntBASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 GPR32P1-201ENST00000601788 811 ntBASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AC011558.1-201ENST00000623459 338 ntBASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AC046158.3-201ENST00000624947 2558 ntBASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SLC52A3Q9NQ40 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.25
SLC52A3Q9NQ40 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC52A3Q9NQ40 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.58■□□□□ 0.25
SLC52A3Q9NQ40 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC52A3Q9NQ40 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC52A3Q9NQ40 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC52A3Q9NQ40 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 AC140113.3-201ENST00000605663 199 ntBASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 AL031432.5-201ENST00000641059 760 ntBASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC52A3Q9NQ40 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms