Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 BET1L-202ENST00000332865 533 ntTSL 5 BASIC17.07■□□□□ 0.32
NCLNQ969V3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.07■□□□□ 0.32
NCLNQ969V3 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.07■□□□□ 0.32
NCLNQ969V3 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NCLNQ969V3 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLNQ969V3 AC116407.4-201ENST00000623319 1061 ntBASIC17.07■□□□□ 0.32
NCLNQ969V3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.07■□□□□ 0.32
NCLNQ969V3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
NCLNQ969V3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NCLNQ969V3 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.07■□□□□ 0.32
NCLNQ969V3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.07■□□□□ 0.32
NCLNQ969V3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.07■□□□□ 0.32
NCLNQ969V3 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NCLNQ969V3 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
NCLNQ969V3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NCLNQ969V3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NCLNQ969V3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
NCLNQ969V3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 MIR662-201ENST00000384847 95 ntBASIC17.06■□□□□ 0.32
NCLNQ969V3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.06■□□□□ 0.32
NCLNQ969V3 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCLNQ969V3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.06■□□□□ 0.32
NCLNQ969V3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.06■□□□□ 0.32
NCLNQ969V3 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.06■□□□□ 0.32
NCLNQ969V3 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NCLNQ969V3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NCLNQ969V3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCLNQ969V3 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.05■□□□□ 0.32
NCLNQ969V3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.05■□□□□ 0.32
NCLNQ969V3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.05■□□□□ 0.32
NCLNQ969V3 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.05■□□□□ 0.32
NCLNQ969V3 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.05■□□□□ 0.32
NCLNQ969V3 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.05■□□□□ 0.32
NCLNQ969V3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.05■□□□□ 0.32
NCLNQ969V3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.05■□□□□ 0.32
NCLNQ969V3 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NCLNQ969V3 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.05■□□□□ 0.32
NCLNQ969V3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCLNQ969V3 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.04■□□□□ 0.32
NCLNQ969V3 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.04■□□□□ 0.32
NCLNQ969V3 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCLNQ969V3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms