Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AC138969.3-201ENST00000546612 1459 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AC138932.2-201ENST00000548268 1459 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AC126755.4-201ENST00000549796 1459 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AKAP8P1-201ENST00000434743 1349 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 ARL16-202ENST00000570561 768 ntTSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AC004790.1-201ENST00000612686 536 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AC009949.1-201ENST00000623048 1830 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 SPDYE7P-202ENST00000420373 878 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 RPS2P32-201ENST00000439199 892 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 MIR6805-201ENST00000615055 62 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 BX276092.7-203ENST00000637198 1536 ntBASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC11.68□□□□□ -0.54
ALMS1Q8TCU4 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 Six3os1_5.1-201ENST00000611000 271 ntBASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
ALMS1Q8TCU4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC11.66□□□□□ -0.54
ALMS1Q8TCU4 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms