Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 AC112698.1-201ENST00000510299 916 ntBASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 AC011467.2-201ENST00000598425 242 ntBASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CLDND2Q8NHS1 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 AC080080.1-201ENST00000625121 2420 ntBASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 INTS4P1-201ENST00000438455 1935 ntBASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 PPIE-208ENST00000470213 927 ntTSL 3 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 AP001005.1-201ENST00000571755 1248 ntBASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 AL773604.1-201ENST00000617417 272 ntBASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 AL645608.8-201ENST00000606034 2086 ntBASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.94□□□□□ -0.02
CLDND2Q8NHS1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 KRT18P67-201ENST00000432816 1264 ntBASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 AF186996.4-201ENST00000467186 377 ntBASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 AC120114.3-201ENST00000611923 658 ntBASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CLDND2Q8NHS1 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms