Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 TOB2P1-201ENST00000469761 992 ntBASIC17.53■□□□□ 0.4
LDB1Q86U70 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.53■□□□□ 0.4
LDB1Q86U70 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC17.53■□□□□ 0.4
LDB1Q86U70 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.53■□□□□ 0.4
LDB1Q86U70 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.53■□□□□ 0.4
LDB1Q86U70 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.53■□□□□ 0.4
LDB1Q86U70 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.53■□□□□ 0.4
LDB1Q86U70 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LDB1Q86U70 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.53■□□□□ 0.4
LDB1Q86U70 AC233702.3-201ENST00000578656 1387 ntBASIC17.53■□□□□ 0.4
LDB1Q86U70 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
LDB1Q86U70 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.53■□□□□ 0.4
LDB1Q86U70 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
LDB1Q86U70 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.52■□□□□ 0.4
LDB1Q86U70 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.52■□□□□ 0.4
LDB1Q86U70 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.52■□□□□ 0.4
LDB1Q86U70 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC17.52■□□□□ 0.4
LDB1Q86U70 LINC00265-3P-201ENST00000447588 903 ntBASIC17.52■□□□□ 0.4
LDB1Q86U70 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.52■□□□□ 0.4
LDB1Q86U70 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.52■□□□□ 0.4
LDB1Q86U70 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.52■□□□□ 0.4
LDB1Q86U70 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.52■□□□□ 0.4
LDB1Q86U70 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.52■□□□□ 0.4
LDB1Q86U70 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.52■□□□□ 0.4
LDB1Q86U70 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.52■□□□□ 0.4
LDB1Q86U70 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.52■□□□□ 0.4
LDB1Q86U70 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.52■□□□□ 0.4
LDB1Q86U70 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LDB1Q86U70 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LDB1Q86U70 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
LDB1Q86U70 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
LDB1Q86U70 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.52■□□□□ 0.39
LDB1Q86U70 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LDB1Q86U70 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDB1Q86U70 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDB1Q86U70 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.52■□□□□ 0.39
LDB1Q86U70 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.52■□□□□ 0.39
LDB1Q86U70 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.52■□□□□ 0.39
LDB1Q86U70 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
LDB1Q86U70 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.52■□□□□ 0.39
LDB1Q86U70 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.52■□□□□ 0.39
LDB1Q86U70 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.52■□□□□ 0.39
LDB1Q86U70 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LDB1Q86U70 PCDHA12-202ENST00000613593 2588 ntBASIC17.51■□□□□ 0.39
LDB1Q86U70 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
LDB1Q86U70 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.51■□□□□ 0.39
LDB1Q86U70 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.51■□□□□ 0.39
LDB1Q86U70 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.51■□□□□ 0.39
LDB1Q86U70 AC109462.3-201ENST00000573934 613 ntBASIC17.51■□□□□ 0.39
LDB1Q86U70 AP001094.4-201ENST00000579008 2176 ntBASIC17.51■□□□□ 0.39
LDB1Q86U70 MIR3180-1-201ENST00000580374 94 ntBASIC17.51■□□□□ 0.39
LDB1Q86U70 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.51■□□□□ 0.39
LDB1Q86U70 MIR3180-3-201ENST00000584616 94 ntBASIC17.51■□□□□ 0.39
LDB1Q86U70 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
LDB1Q86U70 AC019129.2-201ENST00000609837 1235 ntBASIC17.51■□□□□ 0.39
LDB1Q86U70 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.51■□□□□ 0.39
LDB1Q86U70 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.51■□□□□ 0.39
LDB1Q86U70 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
LDB1Q86U70 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.51■□□□□ 0.39
LDB1Q86U70 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.51■□□□□ 0.39
LDB1Q86U70 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.51■□□□□ 0.39
LDB1Q86U70 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LDB1Q86U70 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms