Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 AC036111.1-201ENST00000533973 1582 ntBASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 MIR1224-201ENST00000408193 85 ntBASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 AC008622.2-201ENST00000617006 1229 ntBASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 PCDHA14-201ENST00000506751 2298 ntBASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PPP4R4Q6NUP7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 AL049597.2-201ENST00000565575 961 ntBASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 LGALS8-AS1-201ENST00000487567 1457 ntBASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PPP4R4Q6NUP7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 MIR4674-201ENST00000582457 87 ntBASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 AC140113.3-201ENST00000605663 199 ntBASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 DOC2GP-204ENST00000639052 2548 ntBASIC16.85■□□□□ 0.29
PPP4R4Q6NUP7 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PPP4R4Q6NUP7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms