Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 KRT89P-201ENST00000620027 1478 ntBASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 AL355312.1-201ENST00000407115 2176 ntBASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 GUK1-204ENST00000366721 689 ntTSL 3 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 AC112907.2-201ENST00000448639 330 ntBASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 AL359075.1-203ENST00000462729 1002 ntBASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 AL136038.4-201ENST00000603606 1261 ntBASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 FGF14-AS2-201ENST00000606448 1074 ntBASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 UBALD1-205ENST00000590891 2641 ntBASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
ATPAF1Q5TC12 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 AC046158.3-201ENST00000624947 2558 ntBASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 HBZP1-201ENST00000354915 429 ntBASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 DFFB-212ENST00000625756 649 ntTSL 5 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
ATPAF1Q5TC12 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 AL138688.1-201ENST00000624851 1594 ntBASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
ATPAF1Q5TC12 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 CROCCP2-202ENST00000412962 2773 ntBASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC15.26■□□□□ 0.03
ATPAF1Q5TC12 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms