Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.82■□□□□ 0.28
VSX2P58304 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 AC109462.3-201ENST00000573934 613 ntBASIC16.82■□□□□ 0.28
VSX2P58304 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 AC104692.2-201ENST00000603054 253 ntBASIC16.82■□□□□ 0.28
VSX2P58304 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.82■□□□□ 0.28
VSX2P58304 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.82■□□□□ 0.28
VSX2P58304 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
VSX2P58304 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.81■□□□□ 0.28
VSX2P58304 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
VSX2P58304 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 FGFR3P6-201ENST00000457012 610 ntBASIC16.81■□□□□ 0.28
VSX2P58304 AL160237.2-201ENST00000556165 472 ntBASIC16.81■□□□□ 0.28
VSX2P58304 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
VSX2P58304 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.81■□□□□ 0.28
VSX2P58304 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.81■□□□□ 0.28
VSX2P58304 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 AP000867.4-201ENST00000641616 219 ntBASIC16.81■□□□□ 0.28
VSX2P58304 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
VSX2P58304 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
VSX2P58304 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
VSX2P58304 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.81■□□□□ 0.28
VSX2P58304 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
VSX2P58304 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
VSX2P58304 KRT8P10-201ENST00000450021 1447 ntBASIC16.8■□□□□ 0.28
VSX2P58304 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.8■□□□□ 0.28
VSX2P58304 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.8■□□□□ 0.28
VSX2P58304 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 SLC25A6P5-201ENST00000435663 894 ntBASIC16.8■□□□□ 0.28
VSX2P58304 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.8■□□□□ 0.28
VSX2P58304 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.8■□□□□ 0.28
VSX2P58304 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
VSX2P58304 AD001527.2-201ENST00000622994 785 ntBASIC16.8■□□□□ 0.28
VSX2P58304 TP73-AS1-207ENST00000624167 988 ntBASIC16.8■□□□□ 0.28
VSX2P58304 AC073592.5-201ENST00000624854 528 ntBASIC16.8■□□□□ 0.28
VSX2P58304 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 AL049757.1-201ENST00000616842 1596 ntBASIC16.8■□□□□ 0.28
VSX2P58304 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.8■□□□□ 0.28
VSX2P58304 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.8■□□□□ 0.28
VSX2P58304 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC16.8■□□□□ 0.28
VSX2P58304 AC012313.1-201ENST00000593393 3059 ntBASIC16.8■□□□□ 0.28
VSX2P58304 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.8■□□□□ 0.28
VSX2P58304 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
VSX2P58304 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VSX2P58304 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms