Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.29■□□□□ 0.2
PER3P56645 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PER3P56645 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PER3P56645 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PER3P56645 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
PER3P56645 AC009102.3-201ENST00000623118 1491 ntBASIC16.29■□□□□ 0.2
PER3P56645 AC099343.3-201ENST00000605834 2503 ntBASIC16.28■□□□□ 0.2
PER3P56645 AC112777.1-201ENST00000540175 1423 ntBASIC16.28■□□□□ 0.2
PER3P56645 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PER3P56645 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.28■□□□□ 0.2
PER3P56645 AC243591.1-201ENST00000452967 1364 ntBASIC16.28■□□□□ 0.2
PER3P56645 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
PER3P56645 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 AC005104.2-201ENST00000427818 678 ntBASIC16.28■□□□□ 0.2
PER3P56645 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.28■□□□□ 0.2
PER3P56645 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.28■□□□□ 0.2
PER3P56645 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.28■□□□□ 0.2
PER3P56645 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.28■□□□□ 0.2
PER3P56645 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
PER3P56645 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.28■□□□□ 0.2
PER3P56645 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
PER3P56645 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PER3P56645 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.28■□□□□ 0.2
PER3P56645 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.28■□□□□ 0.2
PER3P56645 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.27■□□□□ 0.2
PER3P56645 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.27■□□□□ 0.2
PER3P56645 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.27■□□□□ 0.2
PER3P56645 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
PER3P56645 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.27■□□□□ 0.2
PER3P56645 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.27■□□□□ 0.2
PER3P56645 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.27■□□□□ 0.2
PER3P56645 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.27■□□□□ 0.2
PER3P56645 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 AC018712.1-201ENST00000455767 687 ntBASIC16.27■□□□□ 0.2
PER3P56645 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.27■□□□□ 0.2
PER3P56645 BNIP3P18-201ENST00000593976 575 ntBASIC16.27■□□□□ 0.2
PER3P56645 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.27■□□□□ 0.2
PER3P56645 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PER3P56645 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
PER3P56645 ESPNP-201ENST00000270691 2015 ntBASIC16.27■□□□□ 0.2
PER3P56645 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PER3P56645 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PER3P56645 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.27■□□□□ 0.19
PER3P56645 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.27■□□□□ 0.19
PER3P56645 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PER3P56645 LINC00896-202ENST00000609602 2128 ntBASIC16.27■□□□□ 0.19
PER3P56645 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.27■□□□□ 0.19
PER3P56645 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
PER3P56645 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PER3P56645 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PER3P56645 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PER3P56645 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.26■□□□□ 0.19
PER3P56645 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.26■□□□□ 0.19
PER3P56645 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
PER3P56645 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PER3P56645 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PER3P56645 MYLKP1-201ENST00000509077 1580 ntBASIC16.26■□□□□ 0.19
PER3P56645 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PER3P56645 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PER3P56645 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PER3P56645 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.26■□□□□ 0.19
PER3P56645 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.26■□□□□ 0.19
PER3P56645 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PER3P56645 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PER3P56645 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.26■□□□□ 0.19
PER3P56645 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PER3P56645 AC132008.2-207ENST00000454517 770 ntBASIC16.26■□□□□ 0.19
PER3P56645 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms