Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC13.39□□□□□ -0.27
TCRAP04437 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TCRAP04437 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.39□□□□□ -0.27
TCRAP04437 BX276092.7-203ENST00000637198 1536 ntBASIC13.39□□□□□ -0.27
TCRAP04437 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TCRAP04437 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TCRAP04437 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 AL603756.1-201ENST00000606511 2163 ntBASIC13.38□□□□□ -0.27
TCRAP04437 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 ABHD17AP1-201ENST00000358206 933 ntBASIC13.38□□□□□ -0.27
TCRAP04437 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 PRR31-201ENST00000371629 978 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC13.38□□□□□ -0.27
TCRAP04437 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 LINC01311-201ENST00000565162 1445 ntBASIC13.38□□□□□ -0.27
TCRAP04437 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
TCRAP04437 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC13.38□□□□□ -0.27
TCRAP04437 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TCRAP04437 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
TCRAP04437 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TCRAP04437 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRAP04437 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC13.37□□□□□ -0.27
TCRAP04437 RPS2P55-201ENST00000397318 883 ntBASIC13.37□□□□□ -0.27
TCRAP04437 AC005104.2-201ENST00000427818 678 ntBASIC13.37□□□□□ -0.27
TCRAP04437 PVRIG2P-201ENST00000435460 978 ntBASIC13.37□□□□□ -0.27
TCRAP04437 AC007663.1-201ENST00000438948 1240 ntBASIC13.37□□□□□ -0.27
TCRAP04437 GXYLT1P6-201ENST00000456472 1187 ntBASIC13.37□□□□□ -0.27
TCRAP04437 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRAP04437 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 AC107956.1-201ENST00000494359 873 ntBASIC13.37□□□□□ -0.27
TCRAP04437 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 MIR3917-201ENST00000580971 93 ntBASIC13.37□□□□□ -0.27
TCRAP04437 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.37□□□□□ -0.27
TCRAP04437 AC024243.1-201ENST00000609234 778 ntBASIC13.37□□□□□ -0.27
TCRAP04437 AC092666.2-201ENST00000613287 246 ntBASIC13.37□□□□□ -0.27
TCRAP04437 AC113410.3-201ENST00000623366 203 ntBASIC13.37□□□□□ -0.27
TCRAP04437 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC13.37□□□□□ -0.27
TCRAP04437 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.37□□□□□ -0.27
TCRAP04437 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC13.37□□□□□ -0.27
TCRAP04437 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TCRAP04437 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms