Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.46■□□□□ 0.23
RRP8O43159 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
RRP8O43159 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC16.46■□□□□ 0.23
RRP8O43159 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RRP8O43159 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.46■□□□□ 0.23
RRP8O43159 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.46■□□□□ 0.23
RRP8O43159 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.46■□□□□ 0.23
RRP8O43159 AC005225.4-201ENST00000557330 545 ntBASIC16.46■□□□□ 0.23
RRP8O43159 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RRP8O43159 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.46■□□□□ 0.23
RRP8O43159 AC092902.6-201ENST00000641783 218 ntBASIC16.46■□□□□ 0.23
RRP8O43159 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RRP8O43159 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RRP8O43159 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.46■□□□□ 0.23
RRP8O43159 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RRP8O43159 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RRP8O43159 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
RRP8O43159 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RRP8O43159 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RRP8O43159 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.45■□□□□ 0.22
RRP8O43159 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.45■□□□□ 0.22
RRP8O43159 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.45■□□□□ 0.22
RRP8O43159 KLF4P1-201ENST00000412782 1185 ntBASIC16.45■□□□□ 0.22
RRP8O43159 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.45■□□□□ 0.22
RRP8O43159 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.45■□□□□ 0.22
RRP8O43159 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.45■□□□□ 0.22
RRP8O43159 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.45■□□□□ 0.22
RRP8O43159 AC068137.2-201ENST00000605408 478 ntBASIC16.45■□□□□ 0.22
RRP8O43159 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RRP8O43159 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 CROCCP3-202ENST00000420820 1947 ntBASIC16.45■□□□□ 0.22
RRP8O43159 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RRP8O43159 AL121761.2-201ENST00000598007 1648 ntBASIC16.45■□□□□ 0.22
RRP8O43159 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RRP8O43159 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
RRP8O43159 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RRP8O43159 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
RRP8O43159 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.44■□□□□ 0.22
RRP8O43159 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RRP8O43159 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC16.44■□□□□ 0.22
RRP8O43159 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RRP8O43159 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.44■□□□□ 0.22
RRP8O43159 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 COX5BP2-201ENST00000392354 334 ntBASIC16.44■□□□□ 0.22
RRP8O43159 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.44■□□□□ 0.22
RRP8O43159 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.44■□□□□ 0.22
RRP8O43159 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RRP8O43159 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.44■□□□□ 0.22
RRP8O43159 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.44■□□□□ 0.22
RRP8O43159 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.44■□□□□ 0.22
RRP8O43159 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.44■□□□□ 0.22
RRP8O43159 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.44■□□□□ 0.22
RRP8O43159 AC093520.2-201ENST00000561830 333 ntBASIC16.44■□□□□ 0.22
RRP8O43159 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.44■□□□□ 0.22
RRP8O43159 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.44■□□□□ 0.22
RRP8O43159 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.44■□□□□ 0.22
RRP8O43159 AC015911.4-201ENST00000588022 1070 ntBASIC16.44■□□□□ 0.22
RRP8O43159 AC022145.2-201ENST00000598203 171 ntBASIC16.44■□□□□ 0.22
RRP8O43159 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.44■□□□□ 0.22
RRP8O43159 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.44■□□□□ 0.22
RRP8O43159 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.44■□□□□ 0.22
RRP8O43159 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.44■□□□□ 0.22
RRP8O43159 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RRP8O43159 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms