Protein–RNA interactions for Protein: O14543

SOCS3, Suppressor of cytokine signaling 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOCS3O14543 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
SOCS3O14543 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
SOCS3O14543 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOCS3O14543 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SOCS3O14543 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SOCS3O14543 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.25□□□□□ -0.29
SOCS3O14543 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.25□□□□□ -0.29
SOCS3O14543 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.25□□□□□ -0.29
SOCS3O14543 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.25□□□□□ -0.29
SOCS3O14543 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
SOCS3O14543 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.25□□□□□ -0.29
SOCS3O14543 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SOCS3O14543 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.25□□□□□ -0.29
SOCS3O14543 AC016396.2-201ENST00000562575 1417 ntBASIC13.25□□□□□ -0.29
SOCS3O14543 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
SOCS3O14543 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
SOCS3O14543 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC13.25□□□□□ -0.29
SOCS3O14543 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.25□□□□□ -0.29
SOCS3O14543 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 KRT18P21-201ENST00000515767 1272 ntBASIC13.25□□□□□ -0.29
SOCS3O14543 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC13.25□□□□□ -0.29
SOCS3O14543 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.25□□□□□ -0.29
SOCS3O14543 AC005336.2-201ENST00000593183 939 ntBASIC13.25□□□□□ -0.29
SOCS3O14543 AL138831.2-201ENST00000606564 490 ntBASIC13.25□□□□□ -0.29
SOCS3O14543 AC124864.1-201ENST00000623408 392 ntBASIC13.25□□□□□ -0.29
SOCS3O14543 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.25□□□□□ -0.29
SOCS3O14543 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
SOCS3O14543 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.25□□□□□ -0.29
SOCS3O14543 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC13.25□□□□□ -0.29
SOCS3O14543 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
SOCS3O14543 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC13.24□□□□□ -0.29
SOCS3O14543 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SOCS3O14543 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SOCS3O14543 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC13.24□□□□□ -0.29
SOCS3O14543 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
SOCS3O14543 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC13.24□□□□□ -0.29
SOCS3O14543 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.24□□□□□ -0.29
SOCS3O14543 AC005332.1-201ENST00000577698 1310 ntBASIC13.24□□□□□ -0.29
SOCS3O14543 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
SOCS3O14543 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.24□□□□□ -0.29
SOCS3O14543 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC13.24□□□□□ -0.29
SOCS3O14543 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.24□□□□□ -0.29
SOCS3O14543 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.24□□□□□ -0.29
SOCS3O14543 NME3-204ENST00000563498 920 ntTSL 2 BASIC13.24□□□□□ -0.29
SOCS3O14543 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SOCS3O14543 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SOCS3O14543 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.24□□□□□ -0.29
SOCS3O14543 AC019129.2-201ENST00000609837 1235 ntBASIC13.24□□□□□ -0.29
SOCS3O14543 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
SOCS3O14543 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
SOCS3O14543 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
SOCS3O14543 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
SOCS3O14543 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SOCS3O14543 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SOCS3O14543 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.23□□□□□ -0.29
SOCS3O14543 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SOCS3O14543 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
SOCS3O14543 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SOCS3O14543 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
SOCS3O14543 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.23□□□□□ -0.29
SOCS3O14543 AC080080.1-201ENST00000625121 2420 ntBASIC13.23□□□□□ -0.29
SOCS3O14543 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
SOCS3O14543 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SOCS3O14543 WAC-202ENST00000347934 2839 ntTSL 5 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms