Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 AF186996.4-201ENST00000467186 377 ntBASIC17.69■□□□□ 0.42
TRIM38O00635 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM38O00635 AC068472.1-201ENST00000474589 881 ntBASIC17.69■□□□□ 0.42
TRIM38O00635 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM38O00635 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM38O00635 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM38O00635 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM38O00635 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM38O00635 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.69■□□□□ 0.42
TRIM38O00635 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.69■□□□□ 0.42
TRIM38O00635 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
TRIM38O00635 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM38O00635 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRIM38O00635 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.69■□□□□ 0.42
TRIM38O00635 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRIM38O00635 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRIM38O00635 TP73-AS1-210ENST00000637775 1455 ntBASIC17.69■□□□□ 0.42
TRIM38O00635 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM38O00635 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.68■□□□□ 0.42
TRIM38O00635 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
TRIM38O00635 PMS2P1-201ENST00000431037 1228 ntBASIC17.68■□□□□ 0.42
TRIM38O00635 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM38O00635 SDHAP2-201ENST00000455183 2001 ntBASIC17.68■□□□□ 0.42
TRIM38O00635 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.68■□□□□ 0.42
TRIM38O00635 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
TRIM38O00635 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 AC008687.5-201ENST00000593746 558 ntBASIC17.68■□□□□ 0.42
TRIM38O00635 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.68■□□□□ 0.42
TRIM38O00635 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRIM38O00635 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.68■□□□□ 0.42
TRIM38O00635 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM38O00635 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TRIM38O00635 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM38O00635 AL024508.2-201ENST00000607749 1894 ntBASIC17.67■□□□□ 0.42
TRIM38O00635 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM38O00635 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM38O00635 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM38O00635 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM38O00635 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM38O00635 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM38O00635 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM38O00635 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRIM38O00635 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM38O00635 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM38O00635 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM38O00635 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.67■□□□□ 0.42
TRIM38O00635 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.67■□□□□ 0.42
TRIM38O00635 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 AC080080.1-201ENST00000625121 2420 ntBASIC17.67■□□□□ 0.42
TRIM38O00635 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRIM38O00635 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.67■□□□□ 0.42
TRIM38O00635 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms