Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A1O00337 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC28A1O00337 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 VENTXP5-201ENST00000523979 775 ntBASIC16.92■□□□□ 0.3
SLC28A1O00337 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC28A1O00337 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC28A1O00337 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC28A1O00337 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC28A1O00337 HYMAI.1-201ENST00000620949 238 ntBASIC16.92■□□□□ 0.3
SLC28A1O00337 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A1O00337 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
SLC28A1O00337 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC28A1O00337 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC28A1O00337 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC28A1O00337 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC28A1O00337 Z83836.1-201ENST00000624605 1642 ntBASIC16.92■□□□□ 0.3
SLC28A1O00337 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC28A1O00337 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC28A1O00337 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC28A1O00337 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SLC28A1O00337 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SLC28A1O00337 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC28A1O00337 AC116353.5-201ENST00000638148 1699 ntBASIC16.91■□□□□ 0.3
SLC28A1O00337 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC28A1O00337 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLC28A1O00337 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC28A1O00337 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC28A1O00337 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC28A1O00337 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLC28A1O00337 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.91■□□□□ 0.3
SLC28A1O00337 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC28A1O00337 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC28A1O00337 KRT18P57-201ENST00000443599 1254 ntBASIC16.91■□□□□ 0.3
SLC28A1O00337 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC28A1O00337 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC28A1O00337 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC28A1O00337 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC28A1O00337 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC28A1O00337 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SLC28A1O00337 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SLC28A1O00337 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC28A1O00337 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC28A1O00337 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC28A1O00337 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SLC28A1O00337 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC28A1O00337 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
SLC28A1O00337 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
SLC28A1O00337 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 MYCLP1-201ENST00000372451 1075 ntBASIC16.9■□□□□ 0.3
SLC28A1O00337 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC28A1O00337 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.9■□□□□ 0.3
SLC28A1O00337 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC28A1O00337 RNF126P1-202ENST00000569893 925 ntBASIC16.9■□□□□ 0.3
SLC28A1O00337 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.9■□□□□ 0.3
SLC28A1O00337 AC006011.2-201ENST00000621313 1158 ntBASIC16.9■□□□□ 0.3
SLC28A1O00337 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.9■□□□□ 0.3
SLC28A1O00337 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC28A1O00337 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms