Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 AC096734.2-201ENST00000562054 433 ntBASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 AP001160.2-201ENST00000596071 487 ntBASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC25.07■■□□□ 1.6
CCDC144AA2RUR9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 RHOQP3-201ENST00000437982 621 ntBASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 PAWRP1-201ENST00000451083 565 ntBASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
CCDC144AA2RUR9 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 PMS2P2-201ENST00000425039 1128 ntBASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC25.05■■□□□ 1.6
CCDC144AA2RUR9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 URGCP-206ENST00000446958 365 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 KRT19P2-202ENST00000557173 1012 ntBASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 CYB561-216ENST00000582297 897 ntTSL 3 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 AL355385.1-201ENST00000606123 409 ntBASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
CCDC144AA2RUR9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
CCDC144AA2RUR9 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms