Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 AC079776.2-201ENST00000641154 1609 ntBASIC18.82■□□□□ 0.6
SNX9Q9Y5X1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 AC005104.2-201ENST00000427818 678 ntBASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 SLC25A6P4-201ENST00000586535 553 ntBASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 AL139288.1-201ENST00000623748 933 ntBASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 AL355312.1-201ENST00000407115 2176 ntBASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
SNX9Q9Y5X1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 AC004817.3-201ENST00000602957 2129 ntBASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 AL133373.2-201ENST00000623187 2828 ntBASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 AC134043.2-201ENST00000624206 2238 ntBASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 SPDYE21P-201ENST00000413323 827 ntBASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 BX005266.1-201ENST00000473402 457 ntBASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 RNPS1P1-201ENST00000507437 918 ntBASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 AC073648.2-201ENST00000510116 352 ntBASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SNX9Q9Y5X1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 KLF4P1-201ENST00000412782 1185 ntBASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 KRT18P67-201ENST00000432816 1264 ntBASIC18.79■□□□□ 0.6
SNX9Q9Y5X1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms