Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 AC010460.3-201ENST00000511359 1579 ntBASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 AL022342.1-201ENST00000400363 863 ntBASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 VENTXP7-201ENST00000475503 772 ntBASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 AC096582.2-201ENST00000510860 516 ntBASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 MIR5100-201ENST00000579544 119 ntBASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 TP73-AS1-207ENST00000624167 988 ntBASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
HRH3Q9Y5N1 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 AC009053.2-201ENST00000563701 2365 ntBASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
HRH3Q9Y5N1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 AC009949.1-201ENST00000623048 1830 ntBASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 POM121L3P-201ENST00000419331 1163 ntBASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 SAPCD2P3-201ENST00000455031 850 ntBASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 AC120057.1-201ENST00000483947 663 ntBASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 RNA5SP419-201ENST00000515908 135 ntBASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 AC141586.5-201ENST00000624546 2050 ntBASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
HRH3Q9Y5N1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 AL662844.1-201ENST00000546340 181 ntBASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
HRH3Q9Y5N1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms