Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PCDHB9Q9Y5E1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 AC132008.2-207ENST00000454517 770 ntBASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 AC006116.8-202ENST00000587620 1550 ntBASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 NOC2LP2-201ENST00000407594 1944 ntBASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.86■□□□□ 0.45
PCDHB9Q9Y5E1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 COX5BP2-201ENST00000392354 334 ntBASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 AC005104.2-201ENST00000427818 678 ntBASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 INTS4P1-201ENST00000438455 1935 ntBASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 AL691403.2-201ENST00000618460 490 ntBASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 BX276092.7-203ENST00000637198 1536 ntBASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
PCDHB9Q9Y5E1 AC068880.1-201ENST00000507289 2297 ntBASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
PCDHB9Q9Y5E1 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms