Protein–RNA interactions for Protein: Q9UKV0

HDAC9, Histone deacetylase 9, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9Q9UKV0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 OR7E47P-204ENST00000575924 449 ntBASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 AC093677.2-201ENST00000600169 1863 ntBASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HDAC9Q9UKV0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
HDAC9Q9UKV0 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 DDT-204ENST00000404092 805 ntTSL 3 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 AP000344.2-201ENST00000512987 629 ntBASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
HDAC9Q9UKV0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 AC093503.3-201ENST00000624917 2352 ntBASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 PI4KAP1-204ENST00000612579 1703 ntBASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.94■□□□□ 0.94
HDAC9Q9UKV0 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC20.93■□□□□ 0.94
HDAC9Q9UKV0 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms