Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHCHD3Q9NX63 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CHCHD3Q9NX63 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.42■□□□□ 0.22
CHCHD3Q9NX63 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CHCHD3Q9NX63 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 AC007326.2-201ENST00000624224 7579 ntBASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 UNC93B4-201ENST00000505679 747 ntBASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 AC092437.1-201ENST00000624794 1048 ntBASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 AC006116.8-202ENST00000587620 1550 ntBASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 AC026691.1-201ENST00000602502 2017 ntBASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CHCHD3Q9NX63 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 BANP-203ENST00000393207 2438 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 AC100803.2-201ENST00000562459 1963 ntBASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 AL109659.2-201ENST00000606809 1674 ntBASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CHCHD3Q9NX63 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
CHCHD3Q9NX63 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.39■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms