Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 AK4P3-201ENST00000418260 669 ntBASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 AC096633.1-201ENST00000422446 749 ntBASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 AC006011.2-201ENST00000621313 1158 ntBASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LRTM1Q9HBL6 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 AC092647.4-201ENST00000457211 535 ntBASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 HYMAI.1-201ENST00000620949 238 ntBASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 LINC01311-201ENST00000565162 1445 ntBASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.92■□□□□ 0.3
LRTM1Q9HBL6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 Z83836.1-201ENST00000624605 1642 ntBASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.91■□□□□ 0.3
LRTM1Q9HBL6 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms